Degree | Type | Year | Semester |
---|---|---|---|
2500250 Biology | OT | 4 | 0 |
It is a compulsory subject of the Biotechnology Bachelor, which introduces students to the knowledge of Molecular Microbiology. This subject is fundamental in the formation of the student since it enables him to understand the functioning of prokaryotes at the molecular level, allowing an understanding of the potential of microorganisms at the productive level as well as their possible applications.
The specific objectives to be achieved in this subject are the following:
The subject is organized in two distinct parts*:
The content of the subject consists of the following subjects:
Lesson 1. The bacterial chromosome. Structure of the bacterial chromosome. Start replication. Replication, termination and segregation of the bacterial chromosome. Cellular division. The bacterial cell cycle.
Lesson 2. Gene Expression in Prokaryotes I. Structure of bacterial promoters. Monocistronic and polycistronic RNAs. Start and elongation of the bacterial transcript. Bacterial transcription terminators. Degradation of the mRNA. Transcription in archaea. Transcriptional attenuation and regulation of transcription.
Lesson 3. Gene expression in prokaryotes II. Global modulators of gene expression. Multigenic networks. Stressful response. Repression by catabolite. Positive and negative transcriptional regulation. Transcriptional regulators. Bacterial operons. Posttranscriptional regulations. Regulones. Regulatory RNAs.
Lesson 4. Mutagenesis and DNA repair systems in bacteria. Conditional lethal mutations. Suppressor muttations. Mismatch repair. Photoreactivation. Reparation by excision. Adaptive response to alkylating agents. Emergency repair response or SOS system.
Lesson 5. Bacterial Restriction. DNA restriction and modification systems. Types of restriction enzymes. In vivo regulation of restriction-modification. Mcr / Mrr System
Lesson 6. The bacterial-bacteriophage cell system. Attenuated and lytic bacteriophages. Lambda and P22bacteriophages as attenuated bacteriophage models. Restricted and generalized transduction. Phage conversion.
Lesson 7. Mobile genetic elements in bacteria. Insertion sequences. Transposons. Transposition mechanisms and their regulation. Mutagenesis with transposons. Mobile pathogenicity islands. Integrones. Other Mobile genètic elements.
Lesson 8. Plasmids. Molecular structure and property of plasmids. Mechanisms of maintenance. Aggregation and cointegration of plasmids. Replication. Incompatibility groups.
Lesson 9. Conjugation. Plasmid conjugation in Gram-negative and Gram-positive cells. Mobilization of the bacterial chromosome. Other conjugative elements (ICEs). Importance of the conjugative elements in the evolution of the microbial world.
Lesson 10. Transformation. Natural transformation. Competence state. Molecular mechanisms associated with natural transformation. Induced transformation.
Lesson 11. Mechanisms of antimicrobial resistance. Plasmid resistance. Chromosomal resistance. Mechanisms of antimicrobial inactivation. Synthesis of alternative enzymes. Resistances by alternative metabolic pathways. Modifications of cellular structures by plasmid enzymes. Mechanisms of distribution of plasmid resistances.
*Unless the requirements enforced by the health authorities demand a prioritization or reduction of these contents
The subject of Molecular Microbiology consists of two modules of activities*:
Theoretical module: composed of participatory master classes.
Case studies module: consisting of sessions in which practical cases and problems will be solved.
These classes are sessions with a reduced number of students with the dual mission of:
A) To facilitate the understanding of the knowledge exposed in the theoretical classes. The resolution of practical cases should enable the student to integrate theoretical knowledge with practical aspects.
B) To train the student to design basic experiments associated with the subject of the subject and to know how to interpret the obtained data.
At the beginning of the course the student will receive a dossier with a proposal of problems that must be developed during the course. The sessions of this module deal with methodological aspects and solve some of the problems of the dossier.
With the aim that the concepts to be used in the sessions of resolution of practical cases are always coordinated with the contents already developed in the theory classes, in certain moments of the course reordering and / or exchanges between the classes of theory and problems. The autonomous activities of this subject are: study, reading of texts and resolution of problems. Finally, the student also has individual tutorials, which will be held in hours previously agreed.
*Unless the requirements enforced by the health authorities demand shifting to the online modality. In this case, the format will be adapted to the possibilities offered by the UAB’s online tools.
Title | Hours | ECTS | Learning Outcomes |
---|---|---|---|
Type: Directed | |||
Participatory master classes | 30 | 1.2 | 5, 8 |
Practical cases resolution | 15 | 0.6 | 8, 2 |
Type: Supervised | |||
Individual tutorials | 1 | 0.04 | 5, 8 |
Type: Autonomous | |||
Autonomous practical cases resolution | 30 | 1.2 | 5, 8, 2, 3 |
Reading recommended texts | 8 | 0.32 | 2, 3 |
Study | 60 | 2.4 | 8, 2, 3 |
At mid semester, there will be a first evaluation block consisting of two different tests, one based on theory questions, with a specific weight of 10% of the total of the subject, and another of problems solving, with a value of 40%. Both tests will include all concepts developed up to that moment in the theory sessions and in the resolution classes of practical cases.
At the end of the semester the second evaluation block will be carried out, also composed of a test of theory questions (with a value of 10%) and another based on the resolution of problems (with a weight of 40% of the total of the subject). This second part will include all the concepts worked on the theory classes and in the problem-solving classes that have not been evaluated in the first test.
The final grade of the subject will be the average of the marks obtained in both evaluation blocks, as long as none of them has obtained a score lower than 4. This average must necessarily be equal to or greater than 5topass the course. In the event that it is lower, the student must submit to the recovery test. The student can choose between examining the whole subject or only the evaluation block in which he has obtained the lowest mark. In the latter case, the final grade will be determined through the average with the mark obtained in the exam that has not been repeated. To pass the subject, this average must be greater than or equal to 5.
Those students who have not passed the value of 4 in one or in both evaluation blocks will have to examine the pending evaluation block or blocks through a retake process. In the event that the recovery of a single block is made, the grade obtained in this test will average with the mark achieved in the previously passed block, being necessary that this average is greater than or equal to 5 to pass the subject. If it is necessary to retake the two evaluation blocks, the final grade will be the one obtained in this recovery test and that must be at least 5 to pass the course. To be eligible to participate in the retake process, the student should have been previously evaluated in a set of activities equaling at least two-thirds of the final score of the course.
Students who have passed the two evaluationblocks can take a test to improve the final grade that will take place on the datescheduled for the recovery test. The presentation to the improvement exam can be for the subject corresponding to a single evaluation block or both and implies the rejection of the preliminary qualification in the block or blocks that will be reevaluated. If the two blocks are reevaluated, the final grade of the subject will be the score achieved in this improvement test and must be greater than or equal to 5. If only one block is reevaluated, the final grade of the subject will be the average of the mark obtained in this improvement test with the one obtained in the block that has not been reevaluated. In this case, the average should also be equal to or greater than 5 to pass the course.
Students who wish to take the improvement test for one or both blocks must inform the teacher responsible for the subject in writing at least 72 hours before the scheduled day for the recovery test.
Students will be graded as "Non-Evaluable" if the weight in of all conducted evaluation activities is lower than 67% of the final score.
Student’s assessment will performed face-to-face, unless the requirements enforced by the health authorities demand shifting to the online modality. In this case, the format will be adapted to the possibilities offered by the UAB’s online tools.
Title | Weighting | Hours | ECTS | Learning Outcomes |
---|---|---|---|---|
Problems exam (1st block) | 40% of the total of the subject | 2 | 0.08 | 14, 4, 1, 5, 6, 7, 13, 12, 11, 9, 10, 8, 2, 3 |
Problems exam (2nd section) | 40% of the total of the subject | 2 | 0.08 | 5, 8, 2, 3 |
Theory written exam (1st section) | 10% of the total of the subject | 1 | 0.04 | 5, 8, 2, 3 |
Theory written exam (2nd section) | 10% of the total of the subject | 1 | 0.04 | 5, 8, 2, 3 |
Larry Snyder & Wendy Champness. Molecular Genetics of Bacteria (4th Edition). ASM press (ISBN: 978-1-55581-627-8)
Jeremy W. Dale & Simon F. Park. Molecular Genetics of Bacteria, (5th Edition) Wiley- Blackwell (ISBN: 978-0-470-74184-9)
All bibliography related with the matter will be avalaible through the Campus Virtual.